Last updated: 2021-05-27

Checks: 2 0

Knit directory: fa_sim_cal/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: b85e679

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version b85e679. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    .tresorit/
    Ignored:    _targets/
    Ignored:    data/VR_20051125.txt.xz
    Ignored:    data/VR_Snapshot_20081104.txt.xz
    Ignored:    renv/library/
    Ignored:    renv/local/
    Ignored:    renv/staging/

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File	Version	Author	Date	Message
Rmd	b85e679	Ross Gayler	2021-05-27	wflow_publish(c(“analysis/proposal.Rmd”, “analysis/notes.Rmd”,
html	ab90fe6	Ross Gayler	2021-05-18	WIP
Rmd	20a5de5	Ross Gayler	2021-05-16	WIP
html	41ccc1d	Ross Gayler	2021-04-04	Build site.
Rmd	6421aeb	Ross Gayler	2021-04-04	wip
Rmd	411de1e	Ross Gayler	2021-04-04	WIP
html	411de1e	Ross Gayler	2021-04-04	WIP
Rmd	0bd4a5f	Ross Gayler	2021-04-03	WIP
html	0bd4a5f	Ross Gayler	2021-04-03	WIP
Rmd	9b4272d	Ross Gayler	2021-04-02	WIP
html	9b4272d	Ross Gayler	2021-04-02	WIP
Rmd	ec5d588	Ross Gayler	2021-03-30	WIP
Rmd	ebd787e	Ross Gayler	2021-03-28	WIP
html	ebd787e	Ross Gayler	2021-03-28	WIP
Rmd	ef1be3d	Ross Gayler	2021-03-27	WIP
html	ef1be3d	Ross Gayler	2021-03-27	WIP
html	a0b6a56	Ross Gayler	2021-03-21	Build site.
html	6b6e336	Ross Gayler	2021-03-21	Build site.
html	630b399	Ross Gayler	2021-03-21	Build site.
Rmd	2541c14	Ross Gayler	2021-03-21	wflow_publish(c(“analysis/m_00_status.Rmd”, “analysis/index.Rmd”))
html	16d8789	Ross Gayler	2021-03-21	Build site.
Rmd	e59c7a3	Ross Gayler	2021-03-21	wflow_publish(“analysis/index.Rmd”)
html	b9b0243	Ross Gayler	2021-03-21	Build site.
Rmd	3fc56d8	Ross Gayler	2021-03-21	wflow_publish(“analysis/index.Rmd”)
Rmd	dcdc6a2	Ross Gayler	2021-03-05	WIP
html	0a8fa7e	Ross Gayler	2021-03-03	Build site.
Rmd	4260c26	Ross Gayler	2021-03-03	Add section header for overview documents in index
html	67e6fdf	Ross Gayler	2021-03-03	Build site.
Rmd	5b5369f	Ross Gayler	2021-03-03	Add workflow management notes
Rmd	55ee0b1	Ross Gayler	2021-02-27	end of day
html	0d30c5b	Ross Gayler	2021-01-26	Build site.
html	23d740f	Ross Gayler	2021-01-24	Build site.
Rmd	6df8db7	Ross Gayler	2021-01-24	End of day
html	0c48ca5	Ross Gayler	2021-01-17	Build site.
Rmd	3052780	Ross Gayler	2021-01-17	Add 02-1 block vars
html	0405e0b	Ross Gayler	2021-01-15	Build site.
Rmd	00a9ff4	Ross Gayler	2021-01-15	wflow_publish(c(“analysis/index.Rmd”))
html	5ab5dc4	Ross Gayler	2021-01-15	Build site.
Rmd	c674a51	Ross Gayler	2021-01-15	Add 01-6 clean vars
html	c674a51	Ross Gayler	2021-01-15	Add 01-6 clean vars
Rmd	874917f	Ross Gayler	2021-01-13	Revise conclusion re inserted 5 in name
html	c0c5313	Ross Gayler	2021-01-13	Build site.
html	22f0b81	Ross Gayler	2021-01-13	Build site.
Rmd	d3deb84	Ross Gayler	2021-01-13	Add 01-5 check name
html	44538d8	Ross Gayler	2021-01-12	Build site.
html	8cd5fa1	Ross Gayler	2021-01-12	Build site.
html	abb201f	Ross Gayler	2021-01-12	Build site.
Rmd	2ae8660	Ross Gayler	2021-01-12	Add 01-4 check demog
html	cb9bf70	Ross Gayler	2021-01-12	Build site.
Rmd	84d53a0	Ross Gayler	2021-01-12	Add 01-3 check resid
html	6edddf5	Ross Gayler	2021-01-12	Build site.
Rmd	6469262	Ross Gayler	2021-01-12	Add 01-2 check admin
html	6469262	Ross Gayler	2021-01-12	Add 01-2 check admin
html	4a8c170	Ross Gayler	2021-01-10	Build site.
Rmd	9c13ca8	Ross Gayler	2021-01-10	wflow_publish(“analysis/index.Rmd”)
html	03ad324	Ross Gayler	2021-01-05	Build site.
Rmd	b03a2c1	Ross Gayler	2021-01-05	wflow_publish(c(“analysis/index.Rmd”, “analysis/notes.Rmd”))
html	80b360b	Ross Gayler	2021-01-04	Build site.
html	856a513	Ross Gayler	2021-01-04	Build site.
html	838463a	Ross Gayler	2020-12-23	Build site.
html	a618d9e	Ross Gayler	2020-12-23	Build site.
Rmd	c6390cc	Ross Gayler	2020-12-23	wflow_publish("analysis/*.Rmd")
html	36ccc82	Ross Gayler	2020-12-13	Build site.
Rmd	f0a165a	Ross Gayler	2020-12-13	End of day
html	d5eb60b	Ross Gayler	2020-12-10	Build site.
html	01b669c	Ross Gayler	2020-12-10	Build site.
html	1993afa	Ross Gayler	2020-12-10	Build site.
Rmd	9ea6d8a	Ross Gayler	2020-12-10	Fix figure captions
html	bc8c1cc	Ross Gayler	2020-12-06	Build site.
Rmd	c99ceff	Ross Gayler	2020-12-06	First draft of proposal
html	2f9886a	Ross Gayler	2020-12-05	Build site.
html	5f37c79	Ross Gayler	2020-11-30	Build site.
Rmd	c2e37f3	Ross Gayler	2020-11-30	Initial ndex.Rmd
html	c2e37f3	Ross Gayler	2020-11-30	Initial ndex.Rmd
Rmd	2a722d0	Ross Gayler	2020-11-29	end of day
html	2a722d0	Ross Gayler	2020-11-29	end of day
html	03b0a02	Ross Gayler	2020-11-04	Build site.
Rmd	e163b3b	Ross Gayler	2020-11-04	Start workflowr project.

This is the website for the research project “Frequency-Aware Similarity Calibration”.

If you have cloned the project to a local computer this website is rendered in the docs subdirectory of the project directory.

If you are using workflowr to publish the research website it will also be rendered online to GitHub Pages.

This page acts as a table of contents for the website. There are links to the web pages generated from the analysis notebooks and to the rendered versions of manuscripts/documents/presentations.

Project Workflow Status

This notebook displays the computational status of the project, that is, whether everything is up to date. Ironically, this is currently the only notebook that must be run manually, so this notebook only displays the status when the notebook was last executed and there is no indication whether the project status has changed since then.

Overview documents

Proposal

This notebook explains the central ideas behind the project.

Notes

This notebook is for keeping notes of any points that may be useful for later project or manuscript development and which are not covered in the analysis notebooks or at risk of getting lost in the notebooks.

Workflow management

This project uses the targets and workflowr packages for managing the workflow of the project (making sure that the dependencies between computational steps are satisfied). When this work was started there were no easily found examples of using targets and workflowr together. This notebook contains notes on the proposed workflow for using targets and workflowr.

Publications

Links to rendered manuscripts and presentations will go here.

META Notebooks

These notebooks capture the analyses that were carried out to develop the code of the core processing pipeline. They are organised as side-chains to the core processing pipeline.

Typically, a meta notebook will analyse the data available at one stage of the core pipeline, to guide the writing of the functions required to get to the next stage of the core pipeline. These meta notebooks generally conclude with the definition of a function that will be used in the core pipeline.

There may be multiple notebooks all relating to different aspects of the same stage of the core pipeline.

Sometimes the analyses are more diffuse - characterising the data in a way that may be helpful for guiding the development of future core stages, but not immediately resulting in the development of functions for the core pipeline.